LCD-Composer
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Pre-computed Results

As part of our original study, we made available pre-computed LCD search results for each of the 20 canonical amino acids at a 40% composition threshold run on all reference proteomes from UniProt. These constitute a large resource for those interested only in simple LCDs identified by enrichment of a single amino acid. You can download these datasets here.

However, there is an infinite number of search parameter combinations that can be specified when using LCD-Composer, so these datasets only represent a small fraction of possible LCD datasets. We encourage use of the LCD-Composer server and downloadable scripts to perform additional LCD searches.